Aims

The aims of the course are to:

• Engineering means to adopt and adapt ideas from nature and make new engineering entities.
• Interdisciplinary communication between engineers and biologists
• Plan and conduct of biomimetic research projects
• Professional presentation of research proposals and reports

Objectives

As specific objectives, by the end of the course students should be able to:

• Examples of biomimetics research from lectures
• Effective means to conduct literature search
• How to select and structure innovative research projects
• How to conduct a biomimetics project in groups
• Practicing professional presentations

Content

This module aims to introduce methods of conducting interdisciplinjary research of biomimetics. We provide lectures about various biomimetics projects, and the studens will apply knowledge and techniques to their own group projects. 

Introduction and Project assignment (F Iida, W Fiderle, CUED) (2L)

• Introduction of the module;
• Introduction of biomimetics research (concepts and methods)
• Methods of writing research proposals and reports 

Bioinspired legged locomotion (F. Iida, CUED) (2L)

• Foundation of biological locomotion
• Models of legged locomotion
• Analysis, experiments, and applications

Biomimetic adhesion and adhesives (W. Federle, Zoology) (4L)

• Foundation of biological adhesion
• Models of biological adhesion
• Analysis, experiments and application

Orthotic design and assessment (T. Stone, Addenbrooks) (2L)

• Fundamentals of orthotic designs
• Methods of manufacturing and assessment
• Challenges and perspectives

Biomimetic flight dynamics (H. Babinsky, CUED, 2L)

• Foundation of biological flight locomotion
• Models of flapping flight
• Analysis, experiments and applications

Bio-mimetic materials (S. Vignolini, Chemistry, 2L)

• Foundation of bio-mimetic materials for mechanical support
• Foundation of bio-mimetic materials for visual appearance
• Bio-materials for biomimetics  
• Models, methods, and applications

Project Presentations (2L)

Aims

The aims of the course are to:

• develop an understanding of the fundamentals of reinforcement learning, and how they relate to neural and behavioural data on the ways in which the brain learns from rewards
• demonstrate the importance of internal models in neural computations, and provide examples for their behavioural and neural signatures
• introduce alternative ways of modelling single neurons, and the way these single neuron models can be integrated into models of neural networks.
• explain how the dynamical interactions between neurons give rise to emergent phenomena at the level of neural circuits
• describe models of plasticity and learning and how they apply to the basic paradigms of machine learning (supervised, unsupervised, reinforcement) as well as pattern formation in the nervous system
• demonstrate case studies of computational functions that neural networks can implement

Objectives

As specific objectives, by the end of the course students should be able to:

• understand how neurons, and networks of neurons can be modelled in a biomimetic way, and how a systematic simplification of these models can be used to gain deeper insight into them.
• develop an overview of how certain computational problems can be mapped onto neural architectures that solve them.
• recognise the essential role of learning is the organisation of biological nervous systems.
• appreciate the ways in which the nervous system is different from man-made intelligent systems, and their implications for engineering as well as neuroscience.

Content

The course covers basic topics in computational neuroscience, and demonstrates how mathematical analysis and ideas from dynamical systems, machine learning, optimal control, and probabilistic inference can be applied to gain insight into the workings of biological nervous systems. The course also highlights a number of real-world computational problems that need to be tackled by any ‘intelligent’ system, as well as the solutions that biology offers to some of these problems.

Principles of Computational Neuroscience (9L, M Lengyel)

• introduction: the goals of computational neuroscience, levels of analysis, and module plan
• reinforcement learning: theoretical background and basic theorems, alternative algorithmic solutions and multiple leaerning & memory systems, model-based vs. model-free computations, the temporal difference learning theory of dopamine responses
• internal models: theoretical framework, internal models in perception, sensori-motor control, statistical learning, structure learning, neural correlates, neural representations of unceratinty, representational learningr
• associative memory: the Hebbian paradigm, attractor neural networks, the Hopfield network, energy function, capacity, place cells, place cells, long-term plasticity, and navigation, place cell remapping

Network dynamics & Plasticity (4L, G Hennequin)

• linear and non-linear network dynamics
• spiking neural network dynamics
• excitatory-inhiitory balance
• chaotic dynamics
• network mechanisms of selective amplification
• orientation tuning in primary visual cortex

Plasticity & Biophysics (3L, Y Ahmadian)

• Hebbian plasticity
• spike timing-dependant plasticity
• learning receptive fields
• biohysical models of single neurons
• biohysical models of simple circuits

Aims

The aims of the course are to:

• introduce alternative ways of modelling single neurons, and the way these single neuron models can be integrated into models of neural networks.
• describe the challenges posed by neural coding and decoding, and the computational methods that can be applied to study them.
• demonstrate case studies of computational functions that neural networks can implement.
• describe models of plasticity and learning and how they apply to the basic paradigms of machine learning (supervised, unsupervised, reinforcement) as well as pattern formation in the nervous system.
• consider control tasks (sensorimotor and other) faced and solved by the nervous system.
• examine the energy efficiency of neural computations.

Objectives

As specific objectives, by the end of the course students should be able to:

• understand how neurons, and networks of neurons can be modelled in a biomimetic way, and how a systematic simplification of these models can be used to gain deeper insight into them.
• develop an overview of how certain computational problems can be mapped onto neural architectures that solve them.
• recognise the essential role of learning is the organisation of biological nervous systems.
• appreciate the ways in which the nervous system is different from man-made intelligent systems, and their implications for engineering as well as neuroscience.

Content

The course covers basic topics in computational neuroscience, and demonstrates how mathematical analysis and ideas from dynamical systems, machine learning, optimal control, and probabilistic inference can be applied to gain insight into the workings of biological nervous systems. The course also highlights a number of real-world computational problems that need to be tackled by any ‘intelligent’ system, as well as the solutions that biology offers to some of these problems.

Principles of Computational Neuroscience (8L, M Lengyel)

• how is neural activity generated? mechanistic neuron models
• how to predict neural activity? descriptive neuron models
• what should neurons do? normative neuron models
• how to read neural activity? neural decoding
• what happens when many neurons are connected? neural networks
• how to tell a neural network what to do? supervised learning
• how can neuronal networks learn without being told what to do? unsupervised learning
• how do neural networks remember? auto-associative memory
• how can our brains achieve the goal of life? reinforcement learning

Network dynamics & Plasticity (6L, Y Ahmadian

• linear and non-linear network dynamics
• Hebbian plasticity
• spike timing-dependant plasticity
• learning receptive fields

Biophysics (2L, T O'Leary)

• biohysical models of single neurons
• biohysical models of simple circuits

Aims

The aims of the course are to:

• introduce alternative ways of modelling single neurons, and the way these single neuron models can be integrated into models of neural networks.
• describe the challenges posed by neural coding and decoding, and the computational methods that can be applied to study them.
• demonstrate case studies of computational functions that neural networks can implement.
• describe models of plasticity and learning and how they apply to the basic paradigms of machine learning (supervised, unsupervised, reinforcement) as well as pattern formation in the nervous system.
• consider control tasks (sensorimotor and other) faced and solved by the nervous system.
• examine the energy efficiency of neural computations.

Objectives

As specific objectives, by the end of the course students should be able to:

• understand how neurons, and networks of neurons can be modelled in a biomimetic way, and how a systematic simplification of these models can be used to gain deeper insight into them.
• develop an overview of how certain computational problems can be mapped onto neural architectures that solve them.
• recognise the essential role of learning is the organisation of biological nervous systems.
• appreciate the ways in which the nervous system is different from man-made intelligent systems, and their implications for engineering as well as neuroscience.

Content

The course covers basic topics in computational neuroscience, and demonstrates how mathematical analysis and ideas from dynamical systems, machine learning, optimal control, and probabilistic inference can be applied to gain insight into the workings of biological nervous systems. The course also highlights a number of real-world computational problems that need to be tackled by any ‘intelligent’ system, as well as the solutions that biology offers to some of these problems.

Principles of Computational Neuroscience (8L, M Lengyel)

• how is neural activity generated? mechanistic neuron models
• how to predict neural activity? descriptive neuron models
• what should neurons do? normative neuron models
• how to read neural activity? neural decoding
• what happens when many neurons are connected? neural networks
• how to tell a neural network what to do? supervised learning
• how can neuronal networks learn without being told what to do? unsupervised learning
• how do neural networks remember? auto-associative memory
• how can our brains achieve the goal of life? reinforcement learning

Network dynamics & Plasticity (6L, Y Ahmadian

• linear and non-linear network dynamics
• Hebbian plasticity
• spike timing-dependant plasticity
• learning receptive fields

Biophysics (2L, T O'Leary)

• biohysical models of single neurons
• biohysical models of simple circuits

Aims

The aims of the course are to:

• introduce alternative ways of modelling single neurons, and the way these single neuron models can be integrated into models of neural networks.
• describe the challenges posed by neural coding and decoding, and the computational methods that can be applied to study them.
• demonstrate case studies of computational functions that neural networks can implement.
• describe models of plasticity and learning and how they apply to the basic paradigms of machine learning (supervised, unsupervised, reinforcement) as well as pattern formation in the nervous system.
• consider control tasks (sensorimotor and other) faced and solved by the nervous system.
• examine the energy efficiency of neural computations.

Objectives

As specific objectives, by the end of the course students should be able to:

• understand how neurons, and networks of neurons can be modelled in a biomimetic way, and how a systematic simplification of these models can be used to gain deeper insight into them.
• develop an overview of how certain computational problems can be mapped onto neural architectures that solve them.
• recognise the essential role of learning is the organisation of biological nervous systems.
• appreciate the ways in which the nervous system is different from man-made intelligent systems, and their implications for engineering as well as neuroscience.

Content

The course covers basic topics in computational neuroscience, and demonstrates how mathematical analysis and ideas from dynamical systems, machine learning, optimal control, and probabilistic inference can be applied to gain insight into the workings of biological nervous systems. The course also highlights a number of real-world computational problems that need to be tackled by any ‘intelligent’ system, as well as the solutions that biology offers to some of these problems.

Principles of Computational Neuroscience (8L, M Lengyel)

• how is neural activity generated? mechanistic neuron models
• how to predict neural activity? descriptive neuron models
• what should neurons do? normative neuron models
• how to read neural activity? neural decoding
• what happens when many neurons are connected? neural networks
• how to tell a neural network what to do? supervised learning
• how can neuronal networks learn without being told what to do? unsupervised learning
• how do neural networks remember? auto-associative memory
• how can our brains achieve the goal of life? reinforcement learning

Network dynamics & Plasticity (4L, G Hennequin)

• linear and non-linear network dynamics
• Hebbian plasticity
• spike timing-dependant plasticity
• learning receptive fields

Biophysics (2L, T O'Leary)

• energetics of information processing
• the energetic cost of spikes and synapses